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proteome discoverer with the sequest ht algorithm  (Thermo Fisher)


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    Thermo Fisher proteome discoverer with the sequest ht algorithm
    Proteome Discoverer With The Sequest Ht Algorithm, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/sequest+ht+algorithm/proteome+discoverer+with+the+sequest+ht+algorithm/pm39992933-332-7-14
    Average 90 stars, based on 1 article reviews
    proteome discoverer with the sequest ht algorithm - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    other:

    Article Title: Membrane structure-responsive lipid scrambling by TMEM63B to control plasma membrane lipid distribution
    Article Snippet: The MS/MS spectra were used to search the SwissProt database with decoy sequences to identify proteins using the Sequest HT algorithm (Thermo Fisher Scientific).

    Article Title: Characterisation of extracellular vesicles in baculovirus infection of Spodoptera frugiperda cells
    Article Snippet: The MS and MS/MS scans were searched against Uniprot database using Protein Discovery 2.2 software, Sequest HT algorithm (Thermo Fisher Scientific).

    Article Title: Resolving Phenotypic Variability in Mitochondrial Diseases: Preliminary Findings of a Proteomic Approach
    Article Snippet: The bottom-up MS/MS data were elaborated using Proteome Discoverer 2.4.1.15 (Thermo Fisher Scientific) based on the SEQUEST HT algorithm (University of Washington, USA, licensed to Thermo Electron Corp., San Jose, CA, USA) against UniProtKB/Swiss-Prot homo sapiens proteome database.

    Sequencing:

    Article Title: Effects of small molecule-induced dimerization on the programmed death ligand 1 protein life cycle
    Article Snippet: .. Peptides were identified from a database search of MS2 mass spectra using the Sequest HT algorithm (Proteome Discoverer 2.4, Thermo Scientific) against the PDL1-FLAG sequence concatenated with sequences of common protein contaminants, with a precursor mass tolerance of 10 ppm and a fragment mass tolerance of 0.02 Da. ..



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    Journal: iScience

    Article Title: Bromodomain protein BRD8 regulates cell cycle progression in colorectal cancer cells through a TIP60-independent regulation of the pre-RC complex

    doi: 10.1016/j.isci.2023.106563

    Figure Lengend Snippet:

    Article Snippet: Peptide identification was performed using SEQUEST HT algorithm in Proteome Discoverer Software (v2.5) (Thermo Fisher Scientific) based on the statistical criterion of a false discovery rate <1%.

    Techniques: Recombinant, Plasmid Preparation, Cell Cycle Assay, CCK-8 Assay, Flow Cytometry, Viability Assay, Ubiquitin Proteomics, Expressing, Cloning, Mutagenesis, Software